Publication Details

k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading

JAROŠ Jiří and JAROŠ Marta. k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading. In: HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing. New York: Association for Computing Machinery, 2024, pp. 358-360. ISBN 979-8-4007-0413-0.
Czech title
k-Dispatch: Cenove optimalizovane spousteni workflows
Type
conference paper
Language
english
Authors
Jaroš Jiří, doc. Ing., Ph.D. (DCSY FIT BUT)
Jaroš Marta, Ing., PhD. (DCSY FIT BUT)
Keywords

Workflow scheduling, Multi-criteria optimization, HPC, Cloud

Abstract

Automated execution of computational workflows has become a critical issue in achieving high productivity in various research and development fields. Over the last few years, workflows have emerged as a significant abstraction of numerous real-world processes and phenomena, including digital twins, personalized medici-ne, and simulation-based science   in general.
k-Dispatch is a novel tool designed for the efficient offloading of biomedical workflows to remote high-performance computing clusters or cloud. In addition to data transfers, reporting, error handling and remote computations monitoring, k-Dispatch leverages a set of optimizations to dynamically determine suitable execution parameters for individual tasks within workflows, aiming to meet predefined constraints and optimization criteria. k-Dispatch has been successfully deployed within k-Plan, an advanced modelling tool for planning transcranial ultrasound stimulation (TUS) procedures. 

Published
2024
Pages
358-360
Proceedings
HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing
Conference
The 33rd International Symposium on High-Performance Parallel and Distributed Computing, Polo Piagge, University of Pisa Via Giacomo Matteotti 11 56124 Pisa, PI, Italy, IT
ISBN
979-8-4007-0413-0
Publisher
Association for Computing Machinery
Place
New York, US
DOI
10.1145/3625549.3658828
BibTeX 
@INPROCEEDINGS{FITPUB13179,
   author = "Ji\v{r}\'{i} Jaro\v{s} and Marta Jaro\v{s}",
   title = "k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading",
   pages = "358--360",
   booktitle = "HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing",
   year = 2024,
   location = "New York, US",
   publisher = "Association for Computing Machinery",
   ISBN = "979-8-4007-0413-0",
   doi = "10.1145/3625549.3658828",
   language = "english",
   url = "https://www.fit.vut.cz/research/publication/13179"
}
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