Publication Details

Running Large-Scale Ultrasound Simulations on 256 Salomon Nodes

VAVERKA, F.; TREEBY, B.; JAROŠ, J. Running Large-Scale Ultrasound Simulations on 256 Salomon Nodes. Ostrava: 2017. p. 1 (1 s.).
Type
presentation, poster
Language
English
Authors
Vaverka Filip, Ing., Ph.D.
Treeby Bradley
Jaroš Jiří, doc. Ing., Ph.D. (DCSY)
Keywords

Local domain decomposition, k-Wave toolbox, GPU

Abstract

Ultrasound simulation is a critical component of model-based treatment planning for ultrasound therapy. However, the domain sizes are typically thousands of wavelengths in size, leading to large-scale numerical models with 10s of billions of unknowns. This paper presents a novel local Fourier basis domain decomposition for full-wave ultrasound propagation simulations with a custom bell function which ensures that the numerical error is below 0.1% while enabling almost ideal strong scaling. Realistic benchmarks with 6144 Haswell cores across 256 Salomon nodes show significant improvement over native 3D FFT decomposition.

Published
2017
Pages
1–1
Place
Ostrava
BibTeX 
@misc{BUT168712,
  author="Filip {Vaverka} and Bradley {Treeby} and Jiří {Jaroš}",
  title="Running Large-Scale Ultrasound Simulations on 256 Salomon Nodes",
  year="2017",
  pages="1--1",
  address="Ostrava",
  url="https://www.fit.vut.cz/research/publication/11777/",
  note="presentation, poster"
}
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